Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015930876.1_cds_XP_016477846.1_69534
CDS Infomation

[gene=LOC107799267] [db_xref=GeneID:107799267] [protein=WD repeat-containing protein 44-like] [protein_id=XP_016477846.1] [location=complement(join(21158..21828,21914..22007,22096..22175,22264..22315,22431..22588,22685..22775,23049..24647))] [gbkey=CDS]
Sequence

ATGTATCGCAGGACGCTGACTATTAACTGGGATGGACTCGGAGAAGATGATGATGATGAT
CACTTCTTCGAGTCCTCTGACCGTCTTTCCTCGGTCGTTCCCCAGGACTTGGCGTCCTCG
GGATCAGATGATGAGGTTGAGTTTGAGGATAGTCGACATTCTTTCTCGGCCTCGGCTTCT
ATCAAAAAAATCCGAGGCCTTGATATGGAGAAAACAACAATCAACAATCCTCCTCCCATT
GTCATGGAAGATTACGGCATGTGGATGGCTGAGCCTGGAGACGTTAAAGAGCGTCGAAAA
CGCTTACTCCAGGGAATGGGGTTGACAAGCAATAAAGAACTCCTCAAGTTGACTAGTGCA
AAAGTTATACGAGCCATTTCAAGAAAAGTTGATACATGCAAAGATTCTAAAACAAAAGTT
AATATTTCTTCTAAAGAAGAACTAAAACAGGAGGAGCCAGAGCCTGAGCCTGAGCCTGAG
CCTTCGAATTCGCCACCAATTTTGCTGCTCAGGTCGAGATCAGATGGTGACATACAATTT
TTCTCTGTAACTACCAAGAAAAGGAAAGAACAACTAATTGGCGACGTTTCTAAACAACGT
CTCACCAGGACATTTTCAGGAGTTTTGGCACCAACCACAAGAATATGCCAATACGCAAAT
TCTGCTGTAATGGCGCAGCCCAAAAAGGGCACCACAAGTAAATCTTCACCACCACAAAAT
GGCAGTGAGAATATGCCATCATCCACATTGCCAAATGGATGTACTGATTTGGGATTTGCT
TCATTTTTCTTGATAAAAAATCTTGACACTGGAAAAGAATTCATTGTTAAAGAGTCAAAT
GAAGAGGGAATGTGGAATAAGCTCAGTGATTTACAAACTGGAAAGCAACTTTCAATGGAG
GAATTTGAGAAATCTGTTGGATACTCTCCTGTTGTTAAGGAACTGATGCGCCGCGCAAAT
GTTTCAACAAACGATGAAAGGAAACTAAACGTAAATGCATACCTCAATAAGAGTTTCAGA
TATAGCAAGAAAACAGGAGTTGCTCTTTTAAAGAACATAAAAGGAGTTGCAAATAGTATG
AGTGGATTAATAACTGATAAAGAATTCGAACAACCTGCACCAGTGGAACAGAAACAAAAC
AAGAATTCCTCACAATGGATTAAAGTCCGCCAACAAGGAAAGATTTACAAAGATTTTACA
GCTTTGCAATTGTGTCAAGAAATTCAGGCTCATGAGGGATCTATATGGACAATAAGATTC
AGCACGGACGCACGTTACTTAGCAACTGCAGGAGAAGACAGGGTAATTCATGTATGGGAA
GTACAAGAATGTGATGTTATGTCTACAAAACCATCCGATGATCCGAATTCTGTTAGTGAC
ACACCTGTTCATCCAACGGCTGGAAGTAATTCAGACCGTCCGCCCCTGCCAGTAATCACA
CATAAGAAGAAGGGGAAGACTTCTAATAAGAAGAAGGGCAACTCACTTCCAGACTATGTA
AATGTACCAGAAACTGTTTTTGCACTCTCCGAAAAACCAATATGCAGTCTCAATGGTCAT
CAGGACGATGTCCTGGACCTTTCTTGGTCAAAATCTCAGCTGCTTCTTTCATCTTCAATG
GACAAGACAGTGAGGTTATGGGATATTGAAACTCAGAGCTGCTTAAAAATGTTTGCGCAC
AACGATTATGTAACCTGCATACACTTCAATCCAGTAGATGACGATCACTTCATCAGCGGT
TCACTGGATGGAAAAGTCCGAGTTTGGAATGTATCTGATAGGAAAGTTGTGGACTGGACA
GATCTTCATGAAATGGTTACTGCTACTTGCTACACTCCTGATGGCCAGGGTGCTTTAATT
GGCTCACATAAAGGAAGCTGTCGCATGTACAGCGCCTCTGAATGCAAACTGGAACAGAAG
GAAAACATTGAACTCGAACCCAAGAAGAAGTCCCTAGCCAAAAAGGTCACTGGTTTTCAG
TTTGCTCCAGGGAGTTCAACAGAAGTGCTTGTAACTTCAGCTGATTCGCGTATCAGAATT
TTTGATGGATCAGACATGACCTATAAATTTAGAGGTTTCCGGAATACAAGCAGTCAAATT
TCAGCTTCATTCAGTCAAGATGGGAAGTATATCATAAGTGCAAGTGAAGACTCTCAGGTC
TATATATGGAAAAGAGAACCACCTAAAACTGCAAGTGGTAAATCGAAAAGTCTAATCAAT
GTTCAAACTTATGAGTATTTCCAATGTAAAGATGTTTCAGTTGCCATACCGTGGCCTGGC
AGTATAAAAAATCAACCACCACTTGTAGATCAGACACAATCGAAAAGGCATTCAAAACGT
TCCCCGCCACCACCACATCCTACCAATGGATCTCCTACGAGGGAAGACAACTCGGCTGGT
GCAAATAGCAAGAGGCATTTACCACCTCTACCGGCCAGGAAAAACAGCGCAGTGGAGAAA
ATTCAAAGTAGTCAAGATGAGGACTCGGCTCAAGACTCTCCAACAGATCCTGGAGTTGGT
GCTAGTGAATCATTTTCGTCAAGTTCTCCATCGATCAGAGATGGCGATTCACCTTCTATA
TCTTCTTCTAGTAGGTTTGATGGTAGTAACAATCAAGGAAATGTCGCTGTCCAAGCAACA
GCATGGGGCATGGTTATTGTGACCGCAACCTCGGGAGGGGAAATCAGGATCTATCAAAAT
TTTGGGATGCCATTGAAAGCTAGTCGACCGACCAATCTCTTTTAA

Peptide Sequence

PEP ID

XP_016477846.1
PEP Infomation

PREDICTED: WD repeat-containing protein 44-like [Nicotiana tabacum]
Sequence

MYRRTLTINWDGLGEDDDDDHFFESSDRLSSVVPQDLASSGSDDEVEFEDSRHSFSASAS
IKKIRGLDMEKTTINNPPPIVMEDYGMWMAEPGDVKERRKRLLQGMGLTSNKELLKLTSA
KVIRAISRKVDTCKDSKTKVNISSKEELKQEEPEPEPEPEPSNSPPILLLRSRSDGDIQF
FSVTTKKRKEQLIGDVSKQRLTRTFSGVLAPTTRICQYANSAVMAQPKKGTTSKSSPPQN
GSENMPSSTLPNGCTDLGFASFFLIKNLDTGKEFIVKESNEEGMWNKLSDLQTGKQLSME
EFEKSVGYSPVVKELMRRANVSTNDERKLNVNAYLNKSFRYSKKTGVALLKNIKGVANSM
SGLITDKEFEQPAPVEQKQNKNSSQWIKVRQQGKIYKDFTALQLCQEIQAHEGSIWTIRF
STDARYLATAGEDRVIHVWEVQECDVMSTKPSDDPNSVSDTPVHPTAGSNSDRPPLPVIT
HKKKGKTSNKKKGNSLPDYVNVPETVFALSEKPICSLNGHQDDVLDLSWSKSQLLLSSSM
DKTVRLWDIETQSCLKMFAHNDYVTCIHFNPVDDDHFISGSLDGKVRVWNVSDRKVVDWT
DLHEMVTATCYTPDGQGALIGSHKGSCRMYSASECKLEQKENIELEPKKKSLAKKVTGFQ
FAPGSSTEVLVTSADSRIRIFDGSDMTYKFRGFRNTSSQISASFSQDGKYIISASEDSQV
YIWKREPPKTASGKSKSLINVQTYEYFQCKDVSVAIPWPGSIKNQPPLVDQTQSKRHSKR
SPPPPHPTNGSPTREDNSAGANSKRHLPPLPARKNSAVEKIQSSQDEDSAQDSPTDPGVG
ASESFSSSSPSIRDGDSPSISSSSRFDGSNNQGNVAVQATAWGMVIVTATSGGEIRIYQN
FGMPLKASRPTNLF

Transcript Sequence

Gene sequence data has not been registered.